ADASTRA v1.6.10
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rs10019722
chr4:105570046
T
>
G
Sequence
gtaccatgatcacgacagttccag[T/G]cagggagtgaagggagagagccca
ASB in cell types
LNCaP C4-2 (prostate carcinoma)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP C4-2 (prostate carcinoma)
2.53
n/a
3.7·10
-4
1.00
2.00
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Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
ldl cholesterol
GTEx eQTL
Pituitary
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale