ADASTRA v1.6.10
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rs10055946
chr5:40569973
C
>
T
Sequence
ttgtcttcctctggaaatttgctg[C/T]ggcttcatcaccatgaaaatatgt
ASB in cell types
monocyte-derived macrophages
CD14+ monocytes
ASB for transcription factors
SPI1_HUMAN
STAT1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
-3.22
2.06
1.00
8.0·10
-3
2.50
n/a
No Hit
STAT1_HUMAN
-3.80
2.20
1.00
0.02
2.50
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
crohns disease, combined control dataset
,
height
,
irritible bowel syndrome
,
ldl cholesterol
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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log2(Alt/Ref motif p-value)