rs10104390 chr8:8753289 T>C
- Sequence
gtggagccaagatgggtgtgtcca[T/C]gcatagccaagcagcaacaaagac
- ASB in cell types
- germinal center B-cells
- ASB for transcription factors
- BCL6_HUMAN FOXO1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BCL6_HUMAN | 2.07 | 0.39 | 1.96 | n/a | No Hit | |||
| FOXO1_HUMAN | 1.94 | -0.88 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.45 | -0.68 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, body mass index (bmi), hdl cholesterol, height, triglycerides, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Visceral_Omentum, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid