rs10139755 chr14:98899674 C>T
- Sequence
tgaccctgcagttgcagcctgcac[C/T]gtttgtacctggtgtcgtttccag
- ASB in cell types
- MDA-MB-453 (breast adenocarcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- PRGR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | -1.06 | 1.82 | 1.50 | 2.25 | Concordant | |||
| FOXA1_HUMAN | n/a | 2.37 | 2.00 | n/a | No Hit |
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Motif analysis
