rs10144612 chr14:56294326 T>C
- Sequence
ctaggcagaggttgctcttgcacc[T/C]gcctgtgggcagtccgaggtagtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) pancreas H1 (embryonic stem cells) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.04 | 1.50 | 1.54 | 4.28 | Concordant | |||
| RAD21_HUMAN | -1.05 | 1.54 | 1.37 | n/a | n/a |
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Motif analysis
