rs10193797 chr2:133780258 A>C
- Sequence
ttgtgagctgctctcattcttata[A/C]attgatgatgaatctaaaactatg
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte PC9 (lung adenocarcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.77 | 0.67 | 1.54 | n/a | No Hit | |||
| RAD21_HUMAN | 1.22 | 0.24 | 1.71 | n/a | n/a | |||
| SMC3_HUMAN | 1.22 | 0.04 | 1.83 | n/a | n/a |
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