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rs10198135 chr2:102058170 G>A

Sequence
ggctttgtgtacatgtgaacgcct[G/A]tttataaatcaggtgagttaagaa
ASB in cell types
HepG2 (hepatoblastoma) GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN -1.52 1.31 1.000.02 1.33 n/a No Hit
FOXA1_HUMAN -0.20 1.15 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg Whole_Blood

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