rs1019920 chr5:159912526 A>C
- Sequence
cccctccctgacctctgccttact[A/C]aggagcctggtcacattctgttct
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN EP300_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.46 | 1.56 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 0.10 | 1.71 | 1.85 | n/a | n/a | |||
| RAD21_HUMAN | -0.38 | 1.19 | 1.94 | n/a | n/a | |||
| SMC3_HUMAN | -0.37 | 0.99 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 1.09 | 1.96 | 2.11 | n/a | No Hit |
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