rs1020729 chr15:60752873 T>C
- Sequence
tgtacctttcagtgcagattagat[T/C]cattttcctggggctatgtccagc
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) VCaP (prostate carcinoma) HepG2 (hepatoblastoma) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.14 | 1.01 | 1.58 | n/a | No Hit | |||
| GCR_HUMAN | -3.11 | 2.52 | 1.50 | n/a | No Hit |
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