rs1024050 chr5:2783428 C>G
- Sequence
ccaggctggctccctctggaggct[C/G]acgggagaatccgtcttctcccct
- ASB in cell types
- MCF10A (breast epithelial cells) esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.03 | 1.32 | 1.48 | 1.39 | Weak Concordant |
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Motif analysis
