rs10259383 chr7:121137957 T>C
- Sequence
tgaaaggattgcattggatgatct[T/C]acttttttttccagttcccatgta
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- ATF3_HUMAN ZN316_HUMAN IKZF1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -2.38 | 2.81 | 1.50 | n/a | No Hit | |||
| ZN316_HUMAN | -0.67 | 1.66 | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | -2.63 | 1.79 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | -1.90 | 1.90 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, ldl cholesterol change with statins, total body bone mineral density (bmd), total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Muscularis