rs10279816 chr7:124941526 T>C
- Sequence
gcacagtttttaaggataacttgg[T/C]gggtggcggggaagccagtgagcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTBP1_HUMAN | -2.51 | 2.08 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Hippocampus, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Lung, Pancreas, Spleen, Thyroid