rs1029753 chr19:2576274 T>C
- Sequence
gcagcccggacggccccaggggac[T/C]gcagcaaaaacaaacatgccgggt
- ASB in cell types
- MDA-MB-453 (breast adenocarcinoma) CWR22 (prostate carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.80 | 0.64 | 1.53 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, advanced age-related macular degeneration (geographic atrophy), chronic kidney disease, cystatin c in serum, height, neuroblastoma (brain cancer), serum creatinine, waist hip ratio