rs1029846 chr19:45646360 C>G
- Sequence
ccgccttcctcaagtctccaacga[C/G]ggtaaacacctagagtataggcag
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma)
- ASB for transcription factors
- REQU_HUMAN MNT_HUMAN FOXK2_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | -2.29 | 2.25 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.34 | 1.96 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | -2.11 | 2.03 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.78 | 1.77 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -0.11 | 1.79 | 2.00 | n/a | n/a |
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