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rs103458 chr17:77419949 A>G

Sequence
tgcggtggtcttctggtggggggc[A/G]tggctggggaggatgcggtggagg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN KLF9_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 2.42 n/a 5.3·10-31.00 2.00 n/a n/a
KLF9_HUMAN -2.02 2.08 1.000.04 2.00 7.57 Concordant
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Motif analysis

KLF9_HUMAN Concordant
KLF9_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Heart_Left_Ventricle

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