rs1037972 chr16:81366522 C>T
- Sequence
ttttattagagtagttcagtcgtg[C/T]taccagaagagggtgccataacat
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) HeLa Kyoto (cervical adenocarcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.19 | 1.36 | 1.99 | n/a | n/a | |||
| RAD21_HUMAN | 0.55 | 1.18 | 1.94 | n/a | n/a |
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