rs103926 chr20:54067762 G>A
- Sequence
ggcagctagacgactgttgaatgg[G/A]agggggggtggttttgaagggtgg
- ASB in cell types
- K562 (myelogenous leukemia) HT29 (colon adenocarcinoma) HepG2 (hepatoblastoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- RB_HUMAN KDM1A_HUMAN FOXA1_HUMAN NR1H3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RB_HUMAN | 2.10 | n/a | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | 1.81 | 0.08 | 1.56 | n/a | n/a | |||
| FOXA1_HUMAN | 0.52 | 0.64 | 1.43 | n/a | No Hit | |||
| NR1H3_HUMAN | 1.39 | -1.42 | 1.50 | n/a | No Hit |
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