rs10410261 chr19:1897419 G>A
- Sequence
ccattctcctgcctcagccccccg[G/A]atagctggattacaggcgcccacc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN E4F1_HUMAN ENL_HUMAN GABP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.73 | 1.71 | 1.67 | n/a | n/a | |||
| E4F1_HUMAN | -1.97 | 2.32 | 2.00 | n/a | n/a | |||
| ENL_HUMAN | -0.54 | 1.89 | 2.00 | n/a | n/a | |||
| GABP1_HUMAN | -1.79 | 2.01 | 2.00 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 2.22 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Muscle_Skeletal, Ovary, Stomach, Thyroid, Whole_Blood