rs10420720 chr19:4472105 C>G
- Sequence
acctctgttcttattggtcgcctc[C/G]cttctctgtcccctgcacgtggtc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- OVOL3_HUMAN NFYB_HUMAN NFYA_HUMAN ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OVOL3_HUMAN | n/a | 3.13 | 2.00 | n/a | n/a | |||
| NFYB_HUMAN | 2.49 | n/a | 2.00 | n/a | No Hit | |||
| NFYA_HUMAN | 2.35 | -3.24 | 2.00 | n/a | No Hit | |||
| ENL_HUMAN | 1.77 | -0.78 | 2.00 | n/a | n/a | |||
| ZN366_HUMAN | n/a | 0.77 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid