rs10450 chr12:56590822 C>T
- Sequence
aaggacaaagctctctaaactgtc[C/T]agagcaacctgccctgccccggtg
- ASB in cell types
- VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | n/a | 1.29 | 1.00 |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, diastolic blood pressure (dbp), endometriosis, height, hypertension (early onset hypertension), serum creatinine
GTEx eQTL Brain_Caudate_basal_ganglia, Esophagus_Muscularis, Heart_Left_Ventricle, Small_Intestine_Terminal_Ileum, Testis