rs10460401 chr2:200618711 T>G
- Sequence
agttgggtagtgagtggggagcac[T/G]cttctcgagttcctggagcagcag
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.24 | 1.14 | 1.61 | n/a | No Hit | |||
| SMC3_HUMAN | -0.28 | 1.19 | 1.92 | n/a | n/a | |||
| RAD21_HUMAN | -0.19 | 1.29 | 2.05 | n/a | n/a |
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