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rs10490016 chr2:233966495 T>C

Sequence
cattttctatgccttttgtaagaa[T/C]ggactcacgcacaggctatttttg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN IKZF1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN n/a 1.04 1.001.5·10-4 1.33 n/a No Hit
IKZF1_HUMAN -1.13 1.56 1.006.7·10-3 1.33 n/a No Hit
IKZF2_HUMAN -1.05 1.37 1.000.04 1.42 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose ldl cholesterol neuroblastoma (brain cancer)

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