rs10503424 chr8:11796316 C>T
- Sequence
gatctgattacgctgtaaacactc[C/T]gccagatactgtgtaggcccagcc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- IKZF1_HUMAN HDAC2_HUMAN KDM1A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.57 | n/a | 2.00 | n/a | No Hit | |||
| HDAC2_HUMAN | 1.66 | -1.03 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 1.80 | -1.07 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, aortic valve calcium, hdl cholesterol change with statins, premature ovarian failure, salmonella-induced pyroptosis, serum creatinine, stabilized warfarin dose
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood