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rs10511169 chr3:98914528 G>A

Sequence
catcacagtgggtacgggattctc[G/A]ttgtaggaattagttgcacacaat
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN EP300_HUMAN RAD21_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN -0.38 1.64 1.002.2·10-7 2.12 n/a No Hit
EP300_HUMAN -1.65 1.94 1.009.1·10-3 2.25 n/a n/a
RAD21_HUMAN -0.47 0.88 0.900.01 2.00 n/a n/a
SMC3_HUMAN -0.17 1.06 0.950.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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