ADASTRA v1.6.10
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rs10511169
chr3:98914528
G
>
A
Sequence
catcacagtgggtacgggattctc[G/A]ttgtaggaattagttgcacacaat
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN
EP300_HUMAN
RAD21_HUMAN
SMC3_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN
-0.38
1.64
1.00
2.2·10
-7
2.12
n/a
No Hit
EP300_HUMAN
-1.65
1.94
1.00
9.1·10
-3
2.25
n/a
n/a
RAD21_HUMAN
-0.47
0.88
0.90
0.01
2.00
n/a
n/a
SMC3_HUMAN
-0.17
1.06
0.95
0.02
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
rheumatoid arthritis
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)