rs10512441 chr17:32912627 C>T
- Sequence
ctgagcacttaaaacaaacatgga[C/T]tcggtcaaaccagaaatttaaaat
- ASB in cell types
- T47D (invasive ductal carcinoma) breast tumor tissue
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.10 | -0.12 | 1.43 | n/a | No Hit | |||
| ESR1_HUMAN | 1.90 | -0.15 | 1.92 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age of onset of myopia, barnes akathisia rating scale, myopia, triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Liver, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood