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rs1056709 chr6:52498046 T>A

Sequence
ttttttcctcttcaacacattttt[T/A]aaaaatagacctctaagatgatgc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.21 -2.11 9.2·10-41.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol refractive error total cholesterol triglycerides
GTEx eQTL Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

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