rs1060843 chr1:85276474 G>C
- Sequence
aggagaggaggcggagcgggtcgg[G/C]agaaagacggccgccccttcggga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN ETV1_HUMAN SP1_HUMAN NR2C2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | 1.92 | -0.64 | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | 2.07 | -2.48 | 1.50 | n/a | No Hit | |||
| SP1_HUMAN | 2.18 | -1.75 | 2.00 | -1.82 | Weak Concordant | |||
| NR2C2_HUMAN | 1.62 | -1.87 | 1.33 | n/a | No Hit |
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Motif analysis
