rs10743185 chr12:121918529 G>A
- Sequence
acgtgaccaccgccctgccctgtc[G/A]ctttagggcctgtcgcttccggcg
- ASB in cell types
- HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) gastroesophageal sphincter thoracic aorta
- ASB for transcription factors
- CTCF_HUMAN ZBT26_HUMAN MYNN_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.88 | 0.33 | 1.88 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.94 | n/a | 2.00 | n/a | n/a | |||
| MYNN_HUMAN | 2.71 | n/a | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.75 | 0.44 | 1.50 | n/a | n/a | |||
| USF2_HUMAN | 1.47 | -1.36 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Brain_Substantia_nigra, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood