rs107588 chr7:108181304 G>A
- Sequence
tggctgcctatcagtaaaaaatat[G/A]aaatcagtgcctctcaagaacaaa
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN KDM1A_HUMAN HDAC1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.41 | -0.35 | 1.93 | n/a | n/a | |||
| SMC3_HUMAN | 1.17 | -0.14 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 0.62 | n/a | 1.50 | n/a | n/a | |||
| HDAC1_HUMAN | 1.36 | -1.75 | 1.44 | n/a | n/a | |||
| MTG16_HUMAN | 1.94 | -1.67 | 1.33 | n/a | n/a |
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