rs10778461 chr12:106288667 G>A
- Sequence
tggggcgagatttcatcatgctcc[G/A]cagaatggcacacaatttaaaact
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOSL1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOSL1_HUMAN | 2.31 | n/a | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.62 | -0.78 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood