rs10796422 chr1:16645367 A>G
- Sequence
tcaccccaaccccagggcacctca[A/G]gtggccccaccaaaccttcctaac
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZFX_HUMAN SKI_HUMAN RXRB_HUMAN ERF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.40 | -0.02 | 1.89 | n/a | No Hit | |||
| SKI_HUMAN | 2.03 | -2.28 | 1.33 | n/a | n/a | |||
| RXRB_HUMAN | 2.42 | -2.77 | 1.33 | n/a | No Hit | |||
| ERF_HUMAN | 2.38 | -2.81 | 1.33 | n/a | n/a | |||
| ZN335_HUMAN | 2.41 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
