rs10827883 chr10:38526943 A>T
- Sequence
cgaatggaatggaattgaatggac[A/T]cgattggaatggaatacattggaa
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) Reh (ATCC CRL-8286) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ETV6_HUMAN CLOCK_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.57 | 1.47 | 2.37 | n/a | No Hit | |||
| ETV6_HUMAN | n/a | 2.96 | 4.00 | n/a | n/a | |||
| CLOCK_HUMAN | n/a | 2.28 | 3.00 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 2.30 | 3.00 | n/a | n/a | |||
| IRF5_HUMAN | n/a | 2.04 | 3.00 | n/a | n/a |
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