rs10838675 chr11:5815743 T>C
- Sequence
tattgcgtgagatccccaggagaa[T/C]tgaaatcagtatgttgaagaggtg
- ASB in cell types
- GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN ARNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -1.91 | 2.50 | 2.50 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.13 | 1.39 | 1.33 | n/a | n/a | |||
| ARNT_HUMAN | -1.77 | 2.09 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Lung, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Testis