rs10840184 chr11:9166139 T>C
- Sequence
tgtcgccaggctggagtgcagtgg[T/C]gtgatctcagctcgctgcaacctc
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte NB69 (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN KAISO_HUMAN ZN316_HUMAN EP400_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.94 | 0.55 | 1.38 | n/a | No Hit | |||
| KAISO_HUMAN | n/a | 0.90 | 2.00 | n/a | No Hit | |||
| ZN316_HUMAN | 1.91 | -1.81 | 2.00 | n/a | n/a | |||
| EP400_HUMAN | 2.10 | -1.93 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood