rs1084179 chr14:52373679 T>C
- Sequence
ttttaattaagtcccatctcttta[T/C]ctttgtttttgttgcatttgcttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GATA3_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.05 | -0.15 | 1.70 | n/a | No Hit | |||
| GATA3_HUMAN | 0.63 | n/a | 1.50 | -6.87 | Concordant | |||
| ESR1_HUMAN | 1.09 | 0.06 | 1.72 | n/a | No Hit |
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Motif analysis
