rs10844683 chr12:33678439 C>T
- Sequence
gtcatttatctctataactcagag[C/T]agagcacagcatctagcgcatata
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN NCOR1_HUMAN NFE2_HUMAN MTG16_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | 2.26 | -1.11 | 2.17 | n/a | No Hit | |||
| NCOR1_HUMAN | 2.27 | -2.29 | 2.00 | n/a | n/a | |||
| NFE2_HUMAN | 1.68 | -1.23 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | 0.62 | n/a | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | 1.73 | -1.26 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Pancreas, Thyroid