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rs10849 chr3:37053579 C>T

Sequence
gttactgaggcagctggggaaaaa[C/T]gttgagtaaacatgattctacaat
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.88 -0.11 3.8·10-61.00 1.46 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Amygdala Brain_Caudate_basal_ganglia Brain_Cortex Brain_Hippocampus Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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