ADASTRA v1.6.10
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rs10859871
chr12:95318100
A
>
C
Sequence
aactattcagctcatttctttgga[A/C]tcactcccccatgccgccatcctc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
LHSAR (prostate epithelial cells)
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA1_HUMAN
ESR1_HUMAN
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
1.49
0.16
1.6·10
-5
0.54
2.02
n/a
No Hit
ESR1_HUMAN
1.31
-0.24
6.9·10
-4
1.00
2.18
n/a
No Hit
ANDR_HUMAN
-0.18
1.38
1.00
0.04
1.50
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
EMBL-EBI
endometriosis
GRASP
cystatin c in serum
,
endometriosis
,
endometriosis (stage iii or iv disease)
,
refractive error
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)