rs10877904 chr12:62653898 C>T
- Sequence
atagtcaggccattgttaaaccct[C/T]taaaataacaattggtcacagctg
- ASB in cell types
- HUES64 (embryonic stem cells)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | 2.41 | -2.32 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, hdl cholesterol change with statins, homa-b, microalbuminuria, years of education
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Stomach, Whole_Blood