rs10882637 chr10:95601196 T>C
- Sequence
ttaccctgtaaggaagaggatctc[T/C]ggaagttattttactgatccagca
- ASB in cell types
- A549 (lung carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.26 | 1.18 | 1.80 | n/a | n/a | |||
| SMC3_HUMAN | -0.29 | 1.03 | 1.92 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Brain_Hippocampus, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Liver, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood