rs10883371 chr10:99532698 C>A
- Sequence
ctaggtcgggaaggtgcagccacg[C/A]gggaatcaatggttcaggaaccgg
- ASB in cell types
- MRC-iPS-25 (induced pluripotent stem cells)
- ASB for transcription factors
- JARD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JARD2_HUMAN | 1.29 | n/a | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP crohns disease, diastolic blood pressure (dbp), irritible bowel syndrome, primary sclerosing cholangitis, transmission distortion, triglycerides change with statins, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Minor_Salivary_Gland, Small_Intestine_Terminal_Ileum, Spleen, Thyroid