rs10887067 chr10:122102204 A>T
- Sequence
aaaactcccacagagcttaaaaaa[A/T]atattgatgcctagatgccacccc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN EP300_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.24 | 2.19 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | -2.83 | 2.43 | 2.20 | n/a | No Hit | |||
| EP300_HUMAN | -1.85 | 2.23 | 2.50 | n/a | n/a | |||
| RAD21_HUMAN | -0.09 | 1.23 | 2.00 | n/a | n/a | |||
| JUNB_HUMAN | -0.41 | 1.40 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Nerve_Tibial