rs10888437 chr1:151836762 C>G
- Sequence
gtgtgtgtgtgtgtgtgtgtgtgt[C/G]tctgtgtgtgtgtctctgtgtgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells) spleen
- ASB for transcription factors
- IKZF1_HUMAN SMCE1_HUMAN ZN574_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.95 | 1.50 | 1.33 | n/a | No Hit | |||
| SMCE1_HUMAN | n/a | 2.57 | 2.50 | n/a | n/a | |||
| ZN574_HUMAN | n/a | 2.51 | 2.00 | n/a | n/a | |||
| RFX1_HUMAN | n/a | 2.33 | 2.50 | n/a | No Hit | |||
| CREB1_HUMAN | -2.22 | 1.21 | 2.25 | n/a | No Hit |
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