rs10895986 chr11:65134531 C>A
- Sequence
tccggttaacaacactccccaccc[C/A]ctgcgaaccggaacttcgggggtc
- ASB in cell types
- A549 (lung carcinoma) VCaP (prostate carcinoma) LNCaP (prostate carcinoma) CD14+ monocytes
- ASB for transcription factors
- JUN_HUMAN GABPA_HUMAN STAT1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.17 | 0.14 | 2.00 | n/a | No Hit | |||
| GABPA_HUMAN | 0.78 | 1.17 | 1.93 | n/a | No Hit | |||
| STAT1_HUMAN | 1.10 | -0.24 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -2.58 | 1.74 | 2.88 | n/a | No Hit | |||
| KDM5A_HUMAN | 1.74 | -1.47 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood