ADASTRA v1.6.10
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rs10904514
chr10:5488812
G
>
A
Sequence
aagctcctggggtagcttccaggt[G/A]cagccggggttgggaatcgctggc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
K562 (myelogenous leukemia)
MCF-7 C4-12 (invasive breast ductal carcinoma)
ASB for transcription factors
ZFX_HUMAN
FOXA1_HUMAN
NFIB_HUMAN
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN
0.44
1.69
1.00
2.6·10
-3
1.38
n/a
No Hit
FOXA1_HUMAN
0.18
0.85
1.00
0.02
1.55
n/a
No Hit
NFIB_HUMAN
-0.80
1.47
1.00
0.04
1.50
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)