rs10930542 chr2:172300071 A>G
- Sequence
acaagtgtgtctttgtgttttctc[A/G]actctgttgatttggcaaacaatc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.95 | -0.90 | 1.88 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.96 | 0.50 | 1.69 | -2.74 | Concordant |
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Motif analysis
