rs10939024 chr4:24973938 C>G
- Sequence
ctgttccccttgcagtccccgagc[C/G]cgggaagcccgagagggagccctt
- ASB in cell types
- macrophages LNCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- CEBPB_HUMAN E2F1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -0.23 | 3.01 | 1.95 | n/a | No Hit | |||
| E2F1_HUMAN | -2.53 | 2.44 | 1.33 | 6.93 | Concordant |
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Motif analysis
