rs10950400 chr7:1842834 C>T
- Sequence
cacagctgcgtcccacatgtcagc[C/T]cctcgcccagctggccctccctgt
- ASB in cell types
- SK-N-BE(2)-C (neuroblastoma) cranial neural crest cells
- ASB for transcription factors
- TWST1_HUMAN AP2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TWST1_HUMAN | -2.32 | 2.10 | 1.50 | n/a | No Hit | |||
| AP2A_HUMAN | 2.21 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Muscle_Skeletal, Testis, Thyroid