Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs10953925 chr7:121075100 A>G

Sequence
cttgggagcattttcagcattact[A/G]gaggtactttgtatgagtcctacg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
REST_HUMAN NFIC_HUMAN ZN592_HUMAN NRF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN -3.34 2.75 1.003.6·10-5 1.50 n/a No Hit
NFIC_HUMAN -3.00 2.50 1.001.1·10-3 1.50 n/a No Hit
ZN592_HUMAN -2.46 2.25 1.003.1·10-3 1.50 n/a n/a
NRF1_HUMAN -1.04 1.41 1.000.02 1.50 n/a No Hit
HDAC2_HUMAN -0.99 1.54 1.000.04 1.50 n/a n/a
Items per page:
1 – 5 of 5

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd total body bone mineral density (bmd)
GTEx eQTL Cells_Cultured_fibroblasts Lung

Download