rs10993241 chr9:94554606 T>G
- Sequence
tgtggccgagctgcggtctctgat[T/G]tcaccaccaaccgcagcgaggcga
- ASB in cell types
- GM12878 (female B-cells) epithelial cell of prostate RWPE2 RWPE1 (prostate epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN ENL_HUMAN LMBL2_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.16 | 0.28 | 1.34 | n/a | No Hit | |||
| ENL_HUMAN | -2.32 | 2.24 | 1.33 | n/a | n/a | |||
| LMBL2_HUMAN | 2.44 | -3.59 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.82 | 0.34 | 1.30 | n/a | n/a | |||
| CREB1_HUMAN | -0.52 | 1.36 | 1.33 | 5.21 | Concordant |
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Motif analysis
